Insertion junction: CLIP2.058198_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058198
Chromosome:chromosome 10
Location:5030500
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g454734 TIC21,PIC1 (1 of 1) PTHR21649//PTHR21649:SF13//PTHR34548 - CHLOROPHYLL A/B BINDING PROTEIN // LHCA2 PROTEIN // FAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAACATTGCCAGCAACGATACAGGTTGATGCGGGTGTTGTATTGCGC
Internal bar code:CCGCATTAATGGTCCCCTAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1341
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GACCTTCAGGCCTCTGCATT
Suggested primer 2:GACATCGAGAACGTGGTGGT