Insertion junction: CLIP2.058200_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058200
Chromosome:chromosome 5
Location:2188282
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g237450 PSRP1 Plastid-specific ribosomal protein 1; (1 of 1) PTHR33231//PTHR33231:SF1 - FAMILY NOT NAMED // 30S RIBOSOMAL PROTEIN-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAACGCTAGATCGCTATAGGCACGAGCTCACCGGGGACACGCTCGATCA
Internal bar code:TACGTATAACGAGAAACAAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2254
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:AGACTTGGTGAGCACGTGAG
Suggested primer 2:ACGGCCTTAGCAACCTTCTC