Insertion junction: CLIP2.058206_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.058206
Chromosome:chromosome 1
Location:5837505
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g041850 (1 of 10) PTHR12270:SF6 - GLYCOSYLTRANSFERASE-LIKE PROTEIN LARGE intron
Cre01.g800102 (1 of 1) K01411 - nardilysin [EC:3.4.24.61] (NRD1) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGGAATGTGAGTGTTTGAGCGTGTGTGCGGTCGCGGGTGCGGGTGCG
Internal bar code:GTGTAATCGCTTTCGATGAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:97
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAGATGCAGGAGGAGGGG
Suggested primer 2:GCGAATGCGAATGTGAGTCC