Insertion junction: CLIP2.058208_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058208
Chromosome:chromosome 12
Location:3311843
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498850 CEP12 Cysteine endopeptidase; (1 of 3) 3.4.18.1 - Cathepsin X / Lysosomal carboxypeptidase B 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTAGTACGCTGTATTAATACGCGTATTATGGAGAGAGGGTCGCGTAC
Internal bar code:GTATGCTCAGCATAACACGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:301
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGAGGATTCGAGAGGCG
Suggested primer 2:AGCTCAATCACGCACACAGA