Insertion junction: CLIP2.058216_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058216
Chromosome:chromosome 15
Location:396601
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g640900 (1 of 17) IPR029069 - HotDog domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCATACATATTCGTACACATGTGTATCGAGGTGGATGAGTATTAAGG
Internal bar code:ATTCGTTTGCTTGTGTCTAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1614
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGGAGATGTGCTTTGGGC
Suggested primer 2:GGAGTGTGTGGAGTGTGAGG