Insertion junction: CLIP2.058228_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.058228
Chromosome:chromosome 6
Location:5730148
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g288400 uS11m,MRPS11 (1 of 3) PF00411 - Ribosomal protein S11 (Ribosomal_S11); Mitochondrial ribosomal protein S11 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCCTAAACCCACCATGCAACCCCCGCCCAGGCGGCCACTGCTAGCAT
Internal bar code:TTACATGTTCGTAGATGTATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1779
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCTAGGCTACTCGTCGG
Suggested primer 2:ACTACGGGTGGACATAGGCT