Insertion junction: CLIP2.058231_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.058231
Chromosome:chromosome 7
Location:1543528
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g324600 AP2S2 (1 of 1) K11827 - AP-2 complex subunit sigma-1 (AP2S1); Sigma2-Adaptin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTGCCGCCTGCTCCTCCGTGTGCGTCTCTCACATCCTTCAACGCCTG
Internal bar code:TATCGTGTCTGTAAACCTGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3053
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GGGATACGCTACAGCCTTCC
Suggested primer 2:TGGGGTCTGGCACTTTGTTT