Insertion junction: CLIP2.058233_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058233
Chromosome:chromosome 5
Location:2965364
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g230600 UVR8 Ultraviolet-B receptor 8; (1 of 1) PTHR22870//PTHR22870:SF193 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTCGAGCCCACACGCTGCAAGACGTTCTTTGAGTTTCTGAGGAGCGTG
Internal bar code:TACGTAACTCAGTATGTGGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1246
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTGGCCATCTTCACCTC
Suggested primer 2:ATGGGCAGGTCATTCAGGTG