Insertion junction: CLIP2.058233_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.058233
Chromosome:chromosome 5
Location:2965372
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g230600 UVR8 Ultraviolet-B receptor 8; (1 of 1) PTHR22870//PTHR22870:SF193 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCAGTCAGTTTTTCGACCCAACGAGTTTCGCTTGCAGTGCGACCGTTT
Internal bar code:TCGTGATTGGTCGAATTTGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2989
LEAP-Seq percent confirming:92.1569
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGCAGGTCATTCAGGTG
Suggested primer 2:AAGCTGGCCATCTTCACCTC