Insertion junction: CLIP2.058234_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.058234
Chromosome:chromosome 13
Location:4135349
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g591200 HTB38,HTB22 (1 of 27) K11252 - histone H2B (H2B); Histone H2B 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGGAAAGAAGTCTCAGCTCCACGCAGCTCCAGCCCGGAGCGGTGCCGG
Internal bar code:AATTATGTGCCAATGCTATGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1542
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCTAAGAAGGCTGCCAAGGA
Suggested primer 2:AACTTTGTTGACCGAAGCGC