Insertion junction: CLIP2.058234_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058234
Chromosome:chromosome 13
Location:4135366
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g591200 HTB38,HTB22 (1 of 27) K11252 - histone H2B (H2B); Histone H2B 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACCACCAGAATGCGGGACTGGGGAGTTGGGGGCAGGAGGAGGGGTGCG
Internal bar code:TTGGCCCTTAGTACAAACCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1931
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AACTTTGTTGACCGAAGCGC
Suggested primer 2:GCTAAGAAGGCTGCCAAGGA