Insertion junction: CLIP2.058240_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.058240
Chromosome:chromosome 6
Location:4002314
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278210 STA5,PGM,GPM1,PGM1 Phosphoglucomutase 1; (1 of 1) PTHR22573//PTHR22573:SF2 - PHOSPHOHEXOMUTASE FAMILY MEMBER // PHOSPHOGLUCOMUTASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCCACGTTGCAGCCCGGCTGCCTCTTGGGCTGCCCGAACCAAGCCGG
Internal bar code:TCTAGCGATTGCGGTATATTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:999
LEAP-Seq percent confirming:12.2449
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGACATTTCGGGATCGAT
Suggested primer 2:CGAAACAACGCTGCGATAGG