Insertion junction: CLIP2.058242_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.058242
Chromosome:chromosome 6
Location:2158881
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800634 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGACGAAGCGGCCACCGTTGCACAACCCCCGCACCTGCTCAGTCGACGG
Internal bar code:GTGGAGTGAAGCGTTTACTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1750
LEAP-Seq percent confirming:2.63158
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTGAAGGTGGTGGAGTC
Suggested primer 2:CAACAACAAGCATTCCGGCA