Insertion junction: CLIP2.058245_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058245
Chromosome:chromosome 6
Location:2880306
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800648 (1 of 2) PTHR33033//PTHR33033:SF11 - FAMILY NOT NAMED // RNASE H DOMAIN-CONTAINING PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAGAGAAGTCGTACCACTAGTTCCCTAGCAGGTCGCAGCTCACGAAGT
Internal bar code:CGGGAAGTAAGGGGTATAATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3465
LEAP-Seq percent confirming:89.6552
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGGGTTCTTGCTTGCAC
Suggested primer 2:AGTGGAAATGCAGCGCTAGT