Insertion junction: CLIP2.058245_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.058245
Chromosome:chromosome 6
Location:2880308
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800648 (1 of 2) PTHR33033//PTHR33033:SF11 - FAMILY NOT NAMED // RNASE H DOMAIN-CONTAINING PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGGTACAAGATGAGGTGCATACGTACAAGGAATAATGGGTACAGCGT
Internal bar code:GTGGTCACGCTTCGGAACGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:234
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGGAAATGCAGCGCTAGT
Suggested primer 2:CACAGGGTTCTTGCTTGCAC