Insertion junction: CLIP2.058246_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.058246
Chromosome:chromosome 7
Location:1511862
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g324200 BTA1 (1 of 1) K13621 - betaine lipid synthase (BTA1); Diacylglyceryl-N,N%252CN-trimethylhomoserine synthesis protein 3'UTR
Cre07.g800777 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGTGCCCACGCTCGCTGTGACCTGGGCTCCTCTCAGAGCTGTTGGGTA
Internal bar code:AACAAGGCTGTAAAAATTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3769
LEAP-Seq percent confirming:95.1807
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAGCTCTCCCGCTGTATG
Suggested primer 2:ACTGCCGTGTAGCGTTACAA