Insertion junction: CLIP2.058257_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.058257
Chromosome:chromosome 3
Location:6439036
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193150 (1 of 1) PTHR13507//PTHR13507:SF0 - UNCHARACTERIZED // PRKR-INTERACTING PROTEIN 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGTCAGCACACGCGCCGGGACACACGACCACAGGCCCCGCATTCCGA
Internal bar code:TGAATGCCCCAACAAACATCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4182
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGCAAAAGCAGAAGGAAA
Suggested primer 2:GAAAAGCGACCGGATGCATC