Insertion junction: CLIP2.058258_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058258
Chromosome:chromosome 14
Location:1271434
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g616250 PCD4,CPL9 Conserved in the Plant Lineage; (1 of 1) PTHR33824//PTHR33824:SF3 - FAMILY NOT NAMED // POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN-RELATED outside_mRNA
Cre14.g616301 (1 of 83) IPR029044 - Nucleotide-diphospho-sugar transferases 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTTCAATTAACGCAAAGTTTGAGCTGCAGCAAACACCTGCTGCAGCAG
Internal bar code:TGTAGCATGTGTTGTCATTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1511
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CATACATGCATGCCCTTGCC
Suggested primer 2:CAAAGGCACTCCACCAATGC