Insertion junction: CLIP2.058268_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058268
Chromosome:chromosome 8
Location:2628509
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g373300 MAPKKK1 (1 of 1) K04417 - mitogen-activated protein kinase kinase kinase 9 [EC:2.7.11.25] (MAP3K9, MLK1); Mitogen-Activated Protein Kinase Kinase Kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGACCGAGGACAGGGTATGAGGCCTGGTTCAACGTCTGATTGCCAGTG
Internal bar code:CTCGTTATTCAGGTTTTGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1354
LEAP-Seq percent confirming:29.0323
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTGAGCGCTCTAGGAACG
Suggested primer 2:CGCCTGTTCGTTGAATAGCG