Insertion junction: CLIP2.058269_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058269
Chromosome:chromosome 13
Location:4511485
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g603000 PDE19 (1 of 17) 3.1.4.53 - 3',5'-cyclic-AMP phosphodiesterase / cAMP-specific phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase 3'UTR
Cre13.g801576 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACATTCCTTCACACGATGGAGTTTCAACCGATAGCTCTTGGCGCCCCAG
Internal bar code:GATTCGGTCTCCAGTGTGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5071
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CACCGCGGAAGTTATGCATG
Suggested primer 2:AGACGGTTAGCTGGGTTTGG