Insertion junction: CLIP2.058270_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.058270
Chromosome:chromosome 6
Location:1249794
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258650 PGM6 Phosphoglycerate mutase-like protein; (1 of 4) PTHR23029:SF1 - FRUCTOSE-2,6-BISPHOSPHATASE TIGAR 3'UTR
Cre06.g258700 PYC1 (1 of 1) 6.4.1.1 - Pyruvate carboxylase / Pyruvic carboxylase; Pyruvate carboxylase 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAAGTAGTTGTTTGCGCAGCGCGCAAGCGGTTCGAGGGGCAGCGTAAC
Internal bar code:CCGAGTCACTCTAGTAGGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2220
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ACATTGTTACGGATGGCGGT
Suggested primer 2:CGAATATTGCTGCAACCCGG