Insertion junction: CLIP2.058276_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.058276
Chromosome:chromosome 12
Location:4557833
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g521450 CLPP2 (1 of 1) PTHR10381//PTHR10381:SF11 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT, MITOCHONDRIAL-RELATED; peptidase subunit of mitochondrial ClpXP protease 3'UTR
Cre12.g521500 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTATGTTACGGCCAGTTCTTGCGATCGCGCCTGGCTTGAACCACTTGC
Internal bar code:GGTTTCTCCACTAGCGGCCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1218
LEAP-Seq percent confirming:89.7436
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCAGAAAACGTTGCACAG
Suggested primer 2:AAGAGCGTGTGCCAACGATA