Insertion junction: CLIP2.058281_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058281
Chromosome:chromosome 16
Location:2080847
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g657400 (1 of 62) PF00226 - DnaJ domain (DnaJ) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCTCCCTTTCCACGGGCCGCCCCGTTTTGTCTCCAGAGTTGTCCAAGT
Internal bar code:TGTCTGCTGGAAGCGTGCATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1431
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AGTATGTTTGCAGGGGGCTC
Suggested primer 2:TCATTCATCATCCTCCGCGG