Insertion junction: CLIP2.058299_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058299
Chromosome:chromosome 12
Location:9420716
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801492 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCGGTTACCAGCCTCCAGAGCCCTACAGAGCCCTTCAGAGCGCTTCAG
Internal bar code:TCCATTGAGTAGTACGCAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1754
LEAP-Seq percent confirming:77.1429
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTTCCAGTAGACGTGGGC
Suggested primer 2:CGGTTCAACAGTTTGGCCAG