Insertion junction: CLIP2.058303_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058303
Chromosome:chromosome 2
Location:5447681
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g114050 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCTCCCCAATCTCCTGCCCCGCCAAACGCCGGCGGACCCCCCCGTCA
Internal bar code:TGCGACCCTCTACGGCGACATG

Confirmation - LEAP-Seq

LEAP-Seq distance:200
LEAP-Seq percent confirming:45.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TGAACTGTGCATTGCTTGGC
Suggested primer 2:TCTGTTGACTCGCTGTTCCC