Insertion junction: CLIP2.058314_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058314
Chromosome:chromosome 3
Location:833301
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146367 (1 of 3) PTHR11697:SF74 - WITHOUT CHILDREN, ISOFORM B 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCTATCCTGCTACGGGCACCCGCCTGTCCCATTCGCCTTGCCCGCGGC
Internal bar code:TAGCACTATTACGTACTATACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3775
LEAP-Seq percent confirming:23.75
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:61
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAACAGCTGTTCGCAAGC
Suggested primer 2:ACTCGGACTTCAACGGGAAC