Insertion junction: CLIP2.058316_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.058316
Chromosome:chromosome 3
Location:2206103
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g157300 CAF1 (1 of 1) K12581 - CCR4-NOT transcription complex subunit 7/8 (CNOT7_8, CAF1, POP2); CCR4-associated factor 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCCCAGAACATGCCTTAAACTTCTTCATGCATTTTAGGATAGCCAAAT
Internal bar code:GTATAGGTTTTAGAGCCCTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:5907
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGAGCTTGAAGCCCTTGA
Suggested primer 2:CATGTTATTCCTGCAGGCGC