Insertion junction: CLIP2.058327_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.058327
Chromosome:chromosome 6
Location:2600186
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g800643 (1 of 10) PF13578 - Methyltransferase domain (Methyltransf_24) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAGGCCAACCTGGACGCCAGCGGCGAGCGCGGCCGCGTGCGCTTCCTG
Internal bar code:AATTCATCACTAAATGGGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:658
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGATGCAGAACAGGGCAG
Suggested primer 2:CCGGTCCCCAACTCCTACTA