Insertion junction: CLIP2.058335_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.058335
Chromosome:chromosome 9
Location:2836032
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390957 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACACGGACGGAATCCGTGTTCCTACCTCGGCCAAACACGAAGTAAGCC
Internal bar code:TCTCGGGGTTGCCGCCGTATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3730
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CCGATTTGAACCCGAGACCA
Suggested primer 2:GCGCGACACCTATAGAACGA