Insertion junction: CLIP2.058342_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058342
Chromosome:chromosome 12
Location:6023512
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534550 PHR4 (1 of 1) PTHR11455:SF2 - BLUE-LIGHT PHOTORECEPTOR PHR2; Putative photolyase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTCACTCACAGTGTCATCCTCACCCTAGCCATACATCATACATAAGCA
Internal bar code:TTATTCTACTTATATCATATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2213
LEAP-Seq percent confirming:77.1429
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TAATCCCCGGTGTGTGTGTG
Suggested primer 2:CAAAATCCGGGTTTGGGCAG