Insertion junction: CLIP2.058345_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.058345
Chromosome:chromosome 6
Location:4702626
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279050 (1 of 7) PTHR11584:SF381 - PROTEIN PQN-80, ISOFORM B 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCACCGGCAACATCATTCGTGGCCTGATGGAATGGGAGTTCCCGGCCT
Internal bar code:TGTTTGCGTCCACTCTGTTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2906
LEAP-Seq percent confirming:98.3333
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTGTATGGGCAGGCTAG
Suggested primer 2:TCGACCGGCCGAAAGTTAAA