Insertion junction: CLIP2.058345_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058345
Chromosome:chromosome 6
Location:4702700
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279050 (1 of 7) PTHR11584:SF381 - PROTEIN PQN-80, ISOFORM B 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATTTGGGGGCGGGGCAACCCTTGCTTGCATGGGGGCCCGCGATGGGG
Internal bar code:AGGTGGTTTAACTAAAAGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1234
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TCGACCGGCCGAAAGTTAAA
Suggested primer 2:GCTCTGTATGGGCAGGCTAG