Insertion junction: CLIP2.058356_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058356
Chromosome:chromosome 12
Location:4882999
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g523950 (1 of 1) PTHR21229//PTHR21229:SF2 - LUNG SEVEN TRANSMEMBRANE RECEPTOR // PROTEIN C15H9.5 3'UTR
Cre12.g801416 (1 of 13) PF12847 - Methyltransferase domain (Methyltransf_18) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAATAAGACACATCCCACCGCACATAGCTGCATAGCTAGCCCTAAGTT
Internal bar code:AACCGAAGCCTGTAACGCCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:296
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCTCCTACCTCGCCCTT
Suggested primer 2:CTGCTCAGCGCTTTTTGTGT