Insertion junction: CLIP2.058359_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058359
Chromosome:chromosome 12
Location:7521558
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g556600 GAP4,GAPN1 (1 of 1) 1.2.1.9 - Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) / Triosephosphate dehydrogenase; Glyceraldehyde 3-phosphate dehydrogenase, nonphosphorylating 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGTCGGCCGTGCTGTAGCCCCCTCCCTCCCCCCCACACACACTCGGC
Internal bar code:TGAGGAGGGGTCGCATCTTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1226
LEAP-Seq percent confirming:57.6271
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGACGATGAGCTATTCCA
Suggested primer 2:GGTATGTAAGGAGCGAGCCC