Insertion junction: CLIP2.058360_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058360
Chromosome:chromosome 9
Location:5877839
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411900 SHMT3 (1 of 3) 2.1.2.1 - Glycine hydroxymethyltransferase / Threonine aldolase; Serine hydroxymethyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAATGACAGTTGCCGTACTTCTCGTTCCATCGTCGGAGAACTCTGTTT
Internal bar code:GTTATTTTAAAGTGCGCTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:952
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GATCTAGACACGACGGCCTG
Suggested primer 2:GCAAGGTATGCGGCAACAAA