Insertion junction: CLIP2.058367_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.058367
Chromosome:chromosome 9
Location:6024645
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412550 (1 of 3) IPR000104//IPR005069 - Antifreeze protein, type I // Nucleotide-diphospho-sugar transferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAGGCGATACGCCGGACAGGCACGCGGACACAGACACAGACATGGACC
Internal bar code:TCTGGCATGTCATTGAGACTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:6001
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:213
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:213

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATCGAATAGCAGCGCTA
Suggested primer 2:ACACATGGCAATGCAACCAC