Insertion junction: CLIP2.058368_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058368
Chromosome:chromosome 3
Location:899188
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146567 (1 of 781) IPR000104 - Antifreeze protein, type I outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCCACTGGCCTTGCACACACTCCAACTGGCCCACCACTCCACAACCA
Internal bar code:TTGTGGCAGCGATAAATGTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3154
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:102
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:119

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTTGCTCAGTTTGGTGG
Suggested primer 2:TCTCAATTGCAGCGGGTCTT