Insertion junction: CLIP2.058370_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.058370
Chromosome:chromosome 17
Location:5512121
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739350 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGCACATCGCCTTGCAAGCAACTCACATGTAAAGCGTTGCCTTGGTAT
Internal bar code:GGACACGGATTCCTGTAAGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1558
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCTGGGCACGGAGATGAA
Suggested primer 2:CCGTAGAGGCTCTTTGGCAA