Insertion junction: CLIP2.058370_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058370
Chromosome:chromosome 17
Location:5512124
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739350 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTCTGTTCGCAAAGCTAGGATGCCAATCTAGCCCCGCCCTCGCGTTCC
Internal bar code:GGACACGGATTCCTGTAAGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1146
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTAGAGGCTCTTTGGCAA
Suggested primer 2:GTTCTGGGCACGGAGATGAA