Insertion junction: CLIP2.058374_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058374
Chromosome:chromosome 17
Location:2802661
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718185 (1 of 19) PF00534 - Glycosyl transferases group 1 (Glycos_transf_1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACGCAGCTCGAAGCTCCACCTCCTTGTGTGACCCCAGATCAATGACA
Internal bar code:AAAGTCCTTTTGCGCTACGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:813
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCTCTGCCAATTGTTTGC
Suggested primer 2:ACGCTAGGTGCTTACGTGAC