Insertion junction: CLIP2.058377_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058377
Chromosome:chromosome 4
Location:2451749
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g221750 (1 of 88) IPR011333 - POZ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCACGGGTCAATTATGCATCGCGGGTCCATCCATCAACCTGGCAAAAA
Internal bar code:TCTTTGATTCATCTCCTTGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2412
LEAP-Seq percent confirming:98.0392
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGTCAGCCAGCAGTCATG
Suggested primer 2:AGGCAGCACAGGAGGAAATC