Insertion junction: CLIP2.058384_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058384
Chromosome:chromosome 3
Location:9079827
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g201776 (1 of 1) IPR006575//IPR016135 - RWD domain // Ubiquitin-conjugating enzyme/RWD-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCATACGGAGGCAAGGGCGCGTGGGGCCGAGGGTGGTGCGTGGAGCG
Internal bar code:GGCTACAGAATAATTATCCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:750
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGAAGTCGAGTGCGGGTA
Suggested primer 2:AAGGGGCTGCCCTAAACATC