Insertion junction: CLIP2.058387_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058387
Chromosome:chromosome 6
Location:5898714
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g289750 CYCD2 D-type cyclin; (1 of 3) K06627 - cyclin A (CCNA) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGGTGCTGAGCTGCAGGTGCACGGGCAGGGCTAGCAGGACGCAGGGCT
Internal bar code:CGTAAAGGATTGGTCCTGAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:742
LEAP-Seq percent confirming:57.6923
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CAATCAATCTGCCGTCTGCG
Suggested primer 2:CCCTTTCGTGGTGCTCTGAT