Insertion junction: CLIP2.058396_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.058396
Chromosome:chromosome 1
Location:2876991
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g017850 DIV166 5'UTR
Cre01.g017900 (1 of 8) IPR011047//IPR018391 - Quinonprotein alcohol dehydrogenase-like superfamily // Pyrrolo-quinoline quinone beta-propeller repeat 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATGCATCAGTTAGCGACAAGCTGCCAACAACAGGGCGTGTGAGCGCCA
Internal bar code:CATCGGAGTGGAGGCGTCCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5083
LEAP-Seq percent confirming:97.8022
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:GCGATGTCCTAGAGTGGTCG
Suggested primer 2:CTCAGGCAGCTGCTTCTTCT