Insertion junction: CLIP2.058396_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058396
Chromosome:chromosome 1
Location:2876992
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g017850 DIV166 5'UTR
Cre01.g017900 (1 of 8) IPR011047//IPR018391 - Quinonprotein alcohol dehydrogenase-like superfamily // Pyrrolo-quinoline quinone beta-propeller repeat 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGCTGATTAAGCGATAAAATGGTGAAAAGGCAGAAGGAAGCGCGACC
Internal bar code:CATCGGAGTGGAGGCGTCCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:507
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAGGCAGCTGCTTCTTCT
Suggested primer 2:GCGATGTCCTAGAGTGGTCG