Insertion junction: CLIP2.058397_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.058397
Chromosome:chromosome 4
Location:2700089
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g223400 (1 of 11) PF13229 - Right handed beta helix region (Beta_helix) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGAGTGTCTGTGTCACGCCTGACCCAAACGGCTGCCGACAGGCTTTGC
Internal bar code:TTTTGAAACACGCACCTGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:6228
LEAP-Seq percent confirming:98.4848
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGTATCGTATCCGGCCTA
Suggested primer 2:CAATTGCTGCGAGACGGATG