Insertion junction: CLIP2.058402_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058402
Chromosome:chromosome 8
Location:2215839
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g370150 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCCCCATGGGTCATGGGAGGTATCCTTAAAAGCCGGGGGGCGATGGC
Internal bar code:GATTACCGTGAGTCAGTGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1933
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GACACCTGGTACTGTTCGCA
Suggested primer 2:TGCGATGCAGTACCGGTATC