Insertion junction: CLIP2.058406_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.058406
Chromosome:chromosome 7
Location:3206605
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g333950 VPS45 (1 of 1) K12479 - vacuolar protein sorting-associated protein 45 (VPS45); SM/Sec1-family protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTTGTGACGACTGTGCACAGTGCAAGCTGTGAAGCTGTGCGAAGGGGC
Internal bar code:TTGTAATTTTTACACAGGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:771
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGATCGAAACCGTCCTGCAA
Suggested primer 2:GGAAGCAGACTGCCTGTCAT