Insertion junction: CLIP2.058411_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.058411
Chromosome:chromosome 10
Location:760431
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g801107 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCCTGGCGGCTTCAACCTGGCTGGGGCACCACCTGGAGGCTGGGCCG
Internal bar code:GGTAGGGCGATAAAGAGTAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2221
LEAP-Seq percent confirming:69.8113
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGACACATCCTACGTACG
Suggested primer 2:CGGGGTTGCTGTTTGTTGAG