Insertion junction: CLIP2.058442_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.058442
Chromosome:chromosome 14
Location:3897346
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g632759 (1 of 2) 4.3.1.19 - Threonine ammonia-lyase / Threonine dehydratase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGTTTGGGGCTTGCAAATGTACAAACTGATGTCAGCGGTTTGCTGTG
Internal bar code:AGCGGTCTCATCACTGACCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2216
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGCAAGGTCTCTGATGC
Suggested primer 2:CGTAGCTAGGTAGGAAGCGC